TAP HD_KNOX1 in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

Homeobox
KNOX1
KNOX2
KNOXC

(Domain names are clickable)



List of proteins (7)

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namename additionClick button to show/hide sequence: Download sequence?
c0_seq17_1[180 - 1241] len=3638 path=[3488:0-227 3716:228-233 3722:234-391 3880:392-679 4168:680-722 4211:723-784 4273:785-834 7830:835-859 4348:860-915 4404:916-982 4471:983-1131 4620:1132-1213 4702:1214-1237 4726:1238-3017 6506:3018-3356 7464:3357-3412 7520:3413-3471 6996:3472-3637]
c0_seq23_1[180 - 1241] len=3510 path=[3488:0-227 3716:228-233 3722:234-391 3880:392-679 4168:680-722 4211:723-784 4273:785-834 7830:835-859 4348:860-915 4404:916-982 4471:983-1131 4620:1132-1213 4702:1214-1237 4726:1238-3017 6506:3018-3356 6845:3357-3509]
c0_seq31_1[180 - 1241] len=3243 path=[3488:0-227 3716:228-233 3722:234-391 3880:392-679 4168:680-722 4211:723-784 4273:785-834 7830:835-859 4348:860-915 4404:916-982 4471:983-1131 4620:1132-1213 4702:1214-1237 4726:1238-3017 7520:3018-3076 6996:3077-3242]
c0_seq39_2[493 - 1365] len=1546 path=[3488:0-227 3716:228-233 3722:234-391 9618:392-446 9673:447-515 3880:516-803 4168:804-846 4211:847-908 4273:909-958 7830:959-983 4348:984-1039 4404:1040-1106 4471:1107-1255 4620:1256-1337 4702:1338-1361 9436:1362-1545]
c0_seq40_1[180 - 1241] len=1422 path=[3488:0-227 3716:228-233 3722:234-391 3880:392-679 4168:680-722 4211:723-784 4273:785-834 7830:835-859 4348:860-915 4404:916-982 4471:983-1131 4620:1132-1213 4702:1214-1237 9436:1238-1421]
c0_seq1_3_rccomp4776_c0_seq1_3 [1286 - 375] (REVERSE SENSE) len=1288 path=[1148:0-256 2318:257-374 1405:375-376 1407:377-639 1670:640-1287]
c0_seq2_3_rccomp4776_c0_seq2_3 [1168 - 239] (REVERSE SENSE) len=1170 path=[1148:0-256 1405:257-258 1407:259-521 1670:522-1169]
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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